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Found 4236 results for path Up-Down-Down. Showing entries 1-20.

Graph Cluster Transcripts Mean logCPM logFC M26/M2 FDR M26/M2 Classification Human genes C.elegans genes Annotation
1. MligTCv3c-7348.1 Mlig032554.g8 12.29 -0.254 0.172

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Mlig032554.g8 {Length: 10148} {Pfam: Domain of unknown function (DUF1943) [PF09172.9, score=44.7]; von Willebrand factor type D domain [PF00094.23, score=42.2]; C8 domain [PF08742.9, score=19.7]} {Dmel: FBgn0032136, Apoltp, Apolipoprotein lipid transfer particle, [Score=87.0, Expect=3e-16]} {Smed: dd_Smed_v6_636_0_1, [Score=107, Expect=2e-22]; dd_Smed_v6_194_0_1, [Score=105, Expect=5e-22]} {Smes: dd_Smes_v1_41885_1_1, [Score=107, Expect=1e-22]} {UniRef: UniRef50_UPI0006B0EF8C, PREDICTED: apolipophorins-like n=2 Tax=Limulus polyphemus TaxID=6850 RepID=UPI0006B0EF8C, [Score=139, Expect=9e-30]} {RNA1509_1248, RNA1509_12764, RNA1509_13693, RNA1509_17458, RNA1509_19417, RNA1509_19512, RNA1509_2045, RNA1509_2059, RNA1509_21809, RNA1509_22, RNA1509_22722, RNA1509_230, RNA1509_2338, RNA1509_31149, RNA1509_355, RNA1509_4873, RNA1509_69, RNA1509_778, RNA1509_984}
2. MligTCv3c-13711.3 Mlig008746.g1 11.71 -0.584 0.001

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GenAge

vit-5 Mlig008746.g1 {Length: 7017} {Pfam: von Willebrand factor type D domain [PF00094.23, score=55.5]; Domain of unknown function (DUF1943) [PF09172.9, score=49.9]; Lipoprotein amino terminal region [PF01347.20, score=26.0]} {Dmel: FBgn0087002, Rfabg, Retinoid- and fatty acid-binding glycoprotein, [Score=70.9, Expect=1e-11]; FBgn0032136, Apoltp, Apolipoprotein lipid transfer particle, [Score=68.9, Expect=4e-11]} {Celegans: WBGene00006929, vit-5, Caenorhabditis elegans Protein VIT-5 (vit-5) mRNA, complete cds., [RH, Score=64.7, Expect=5e-10]} {Smed: dd_Smed_v6_194_0_1, [Score=60.5, Expect=1e-08]} {Smes: dd_Smes_v1_41885_2_1, [Score=67.0, Expect=6e-11]} {UniRef: UniRef50_A0A0P6IQR3, Microsomal triglyceride transfer protein large subunit n=70 Tax=Daphnia TaxID=6668 RepID=A0A0P6IQR3_9CRUS, [Score=101, Expect=1e-18]; UniRef50_A0A0P5YEI5, Microsomal triglyceride transfer protein large subunit n=31 Tax=Daphnia magna TaxID=35525 RepID=A0A0P5YEI5_9CRUS, [Score=101, Expect=1e-18]; UniRef50_A0A0P5DJQ1, Putative Microsomal triglyceride transfer protein large subunit n=29 Tax=Daphnia magna TaxID=35525 RepID=A0A0P5DJQ1_9CRUS, [Score=100, Expect=1e-18]} {RNA1509_11, RNA1509_1164, RNA1509_568, RNA1509_9449}
3. MligTCv3c-13711.4 Mlig008746.g4 11.69 -0.568 0.001

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GenAge

vit-5 Mlig008746.g4 {Length: 7025} {SignalP} {Pfam: Lipoprotein amino terminal region [PF01347.20, score=113.0]; von Willebrand factor type D domain [PF00094.23, score=53.8]; Domain of unknown function (DUF1943) [PF09172.9, score=51.7]} {Dmel: FBgn0087002, Rfabg, Retinoid- and fatty acid-binding glycoprotein, [Score=70.9, Expect=1e-11]; FBgn0032136, Apoltp, Apolipoprotein lipid transfer particle, [Score=68.2, Expect=1e-10]} {Celegans: WBGene00006929, vit-5, Caenorhabditis elegans Protein VIT-5 (vit-5) mRNA, complete cds., [RH, Score=63.9, Expect=1e-09]} {Smed: dd_Smed_v6_194_0_1, [Score=67.8, Expect=7e-11]} {Smes: dd_Smes_v1_41885_2_1, [Score=60.1, Expect=1e-08]} {UniRef: UniRef50_UPI0001CBBED9, PREDICTED: vitellogenin-1-like isoform X1 n=2 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CBBED9, [Score=134, Expect=2e-28]} {RNA1509_10961, RNA1509_11, RNA1509_1209, RNA1509_1328, RNA1509_1351, RNA1509_13937, RNA1509_17192, RNA1509_40561, RNA1509_486, RNA1509_56322} {WURTZEL: Gut [dd_Smed_v6_194_0_1, NA]}
4. MligTCv3c-13711.1 Mlig008746.g5 10.28 -0.591 0.000

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GenAge

vit-5 Mlig008746.g5 {Length: 3929} {Pfam: von Willebrand factor type D domain [PF00094.23, score=56.8]} {Celegans: WBGene00006929, vit-5, Caenorhabditis elegans Protein VIT-5 (vit-5) mRNA, complete cds., [RH, Score=62.4, Expect=2e-09]} {UniRef: UniRef50_A0A034WXH7, Vitellogenin 4 (Fragment) n=2 Tax=Ixodoidea TaxID=297308 RepID=A0A034WXH7_RHIMP, [Score=84.3, Expect=7e-14]}
5. MligTCv3c-562.2625 Mlig011676.g1, Mlig011676.g2 9.72 -0.219 0.008

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Germline

TUBB ben-1

Mlig011676.g1 {Length: 1965} {Pfam: Tubulin/FtsZ family, GTPase domain [PF00091.23, score=227.9]; Tubulin C-terminal domain [PF03953.15, score=146.0]; Misato Segment II tubulin-like domain [PF10644.7, score=24.5]} {Human: ENSG00000235067, TUBB, tubulin, beta, [Score=763, Expect=0.0]; ENSG00000227739, TUBB, tubulin, beta, [Score=763, Expect=0.0]; ENSG00000232575, TUBB, tubulin, beta, [Score=763, Expect=0.0]; ENSG00000229684, TUBB, tubulin, beta, [Score=763, Expect=0.0]; ENSG00000183311, TUBB, tubulin, beta, [Score=763, Expect=0.0]; ENSG00000224156, TUBB, tubulin, beta, [Score=763, Expect=0.0]; ENSG00000232421, TUBB, tubulin, beta, [Score=763, Expect=0.0]; ENSG00000196230, TUBB, tubulin, beta, [Score=761, Expect=0.0]; ENSG00000188229, TUBB2C, tubulin, beta 2C, [Score=758, Expect=0.0]; ENSG00000137285, TUBB2B, tubulin, beta 2B, [Score=758, Expect=0.0]; ENSG00000137267, TUBB2A, tubulin, beta 2A, [Score=753, Expect=0.0]; ENSG00000104833, TUBB4, tubulin, beta 4, [Score=750, Expect=0.0]; ENSG00000198211, TUBB3, tubulin, beta 3, [Score=747, Expect=0.0]; ENSG00000176014, TUBB6, tubulin, beta 6, [Score=725, Expect=0.0]} {Dmel: FBgn0003887, betaTub56D, beta-Tubulin at 56D, [Score=754, Expect=0.0]; FBgn0003889, betaTub85D, beta-Tubulin at 85D, [Score=751, Expect=0.0]; FBgn0003888, betaTub60D, beta-Tubulin at 60D, [Score=739, Expect=0.0]; FBgn0003890, betaTub97EF, beta-Tubulin at 97EF, [Score=732, Expect=0.0]} {Celegans: WBGene00000248, ben-1, Caenorhabditis elegans Protein BEN-1 (ben-1) mRNA, complete cds., [Score=753, Expect=0.0]} {Smed: dd_Smed_v6_83_0_3, [Score=766, Expect=0.0]} {Smes: dd_Smes_v1_88073_1_1, [Score=641, Expect=0.0]} {Smans: Smp_192110.1, [Score=766, Expect=0.0]; Smp_078040.1, [Score=764, Expect=0.0]; Smp_079960.1, [Score=755, Expect=0.0]; Smp_079970.1, [Score=737, Expect=0.0]} {UniRef: UniRef50_P07437, Tubulin beta chain n=1408 Tax=Eukaryota TaxID=2759 RepID=TBB5_HUMAN, [Score=761, Expect=0.0]; UniRef50_P68371, Tubulin beta-4B chain n=259 Tax=Eukaryota TaxID=2759 RepID=TBB4B_HUMAN, [Score=758, Expect=0.0]; UniRef50_E2A684, Tubulin beta chain n=79 Tax=Eumetazoa TaxID=6072 RepID=E2A684_CAMFO, [Score=754, Expect=0.0]; UniRef50_A0A147A9R5, Tubulin beta chain n=27 Tax=Bilateria TaxID=33213 RepID=A0A147A9R5_FUNHE, [Score=754, Expect=0.0]} {RNA1509_44}

Mlig011676.g2 {Length: 1972} {Pfam: Tubulin C-terminal domain [PF03953.15, score=147.0]; Tubulin/FtsZ family, GTPase domain [PF00091.23, score=74.3]} {Human: ENSG00000232575, TUBB, tubulin, beta, [Score=511, Expect=0.0]; ENSG00000227739, TUBB, tubulin, beta, [Score=511, Expect=0.0]; ENSG00000235067, TUBB, tubulin, beta, [Score=511, Expect=0.0]; ENSG00000183311, TUBB, tubulin, beta, [Score=511, Expect=0.0]; ENSG00000224156, TUBB, tubulin, beta, [Score=511, Expect=0.0]; ENSG00000232421, TUBB, tubulin, beta, [Score=511, Expect=0.0]; ENSG00000229684, TUBB, tubulin, beta, [Score=511, Expect=0.0]; ENSG00000137285, TUBB2B, tubulin, beta 2B, [Score=509, Expect=0.0]; ENSG00000196230, TUBB, tubulin, beta, [Score=509, Expect=0.0]; ENSG00000137267, TUBB2A, tubulin, beta 2A, [Score=506, Expect=0.0]; ENSG00000188229, TUBB2C, tubulin, beta 2C, [Score=505, Expect=1e-180]; ENSG00000198211, TUBB3, tubulin, beta 3, [Score=502, Expect=1e-180]; ENSG00000104833, TUBB4, tubulin, beta 4, [Score=499, Expect=1e-177]; ENSG00000176014, TUBB6, tubulin, beta 6, [Score=493, Expect=1e-175]; ENSG00000173876, RP11-631M21.2, Tubulin beta-8 chain, [Score=489, Expect=1e-174]} {Dmel: FBgn0003887, betaTub56D, beta-Tubulin at 56D, [Score=508, Expect=0.0]; FBgn0003889, betaTub85D, beta-Tubulin at 85D, [Score=507, Expect=0.0]; FBgn0003888, betaTub60D, beta-Tubulin at 60D, [Score=507, Expect=0.0]; FBgn0003890, betaTub97EF, beta-Tubulin at 97EF, [Score=502, Expect=1e-179]} {Celegans: WBGene00000248, ben-1, Caenorhabditis elegans Protein BEN-1 (ben-1) mRNA, complete cds., [Score=510, Expect=0.0]} {Smed: dd_Smed_v6_83_0_3, [Score=513, Expect=0.0]} {Smes: dd_Smes_v1_88073_1_1, [Score=432, Expect=1e-152]} {Smans: Smp_079960.1, [Score=518, Expect=0.0]; Smp_192110.1, [Score=514, Expect=0.0]; Smp_079970.1, [Score=514, Expect=0.0]; Smp_078040.1, [Score=513, Expect=0.0]} {UniRef: UniRef50_P07437, Tubulin beta chain n=1408 Tax=Eukaryota TaxID=2759 RepID=TBB5_HUMAN, [Score=508, Expect=1e-179]; UniRef50_P61857, Tubulin beta-2 chain n=1573 Tax=Eukaryota TaxID=2759 RepID=TBB2_DROME, [Score=507, Expect=1e-179]; UniRef50_E2A684, Tubulin beta chain n=79 Tax=Eumetazoa TaxID=6072 RepID=E2A684_CAMFO, [Score=507, Expect=1e-178]; UniRef50_P68371, Tubulin beta-4B chain n=259 Tax=Eukaryota TaxID=2759 RepID=TBB4B_HUMAN, [Score=505, Expect=1e-178]; UniRef50_A0A147A9R5, Tubulin beta chain n=27 Tax=Bilateria TaxID=33213 RepID=A0A147A9R5_FUNHE, [Score=503, Expect=1e-177]; UniRef50_W5UK11, Tubulin beta chain n=12 Tax=Bilateria TaxID=33213 RepID=W5UK11_ICTPU, [Score=503, Expect=1e-177]} {RNA1509_44}
6. MligTCv3c-18635.0 Mlig016013.g1 9.68 0.576 0.000

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APOB vit-6 Mlig016013.g1 {Length: 22235} {SignalP} {Pfam: Lipoprotein amino terminal region [PF01347.20, score=263.8]; Domain of unknown function (DUF1943) [PF09172.9, score=220.9]; von Willebrand factor type D domain [PF00094.23, score=55.2]; C8 domain [PF08742.9, score=24.7]} {Human: ENSG00000084674, APOB, apolipoprotein B (including Ag(x) antigen), [RH, Score=177, Expect=9e-43]} {Dmel: FBgn0032136, Apoltp, Apolipoprotein lipid transfer particle, [RH, Score=341, Expect=1e-92]} {Celegans: WBGene00006930, vit-6, Caenorhabditis elegans Protein VIT-6, isoform a (vit-6) mRNA, complete cds., [RH, Score=63.9, Expect=5e-09]} {Smed: dd_Smed_v6_194_0_1, [Score=454, Expect=1e-127]} {Smes: dd_Smes_v1_41885_2_1, [Score=312, Expect=3e-92]} {UniRef: UniRef50_UPI000695DA18, PREDICTED: uncharacterized protein LOC106166028 n=2 Tax=Lingula unguis TaxID=7574 RepID=UPI000695DA18, [Score=662, Expect=0.0]} {RNA1509_13513, RNA1509_1654, RNA1509_19271, RNA1509_29467, RNA1509_31, RNA1509_3855, RNA1509_43326, RNA1509_5268, RNA1509_8161, RNA1509_8792}
7. MligTCv3c-5529.0 Mlig999031.g1 9.38 -0.293 0.114

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Mlig999031.g1 {Length: 1557} {MITOS: nad5, NADH dehydrogenase subunit 5} {NoTransDecoderORF} {RNA1509_11381, RNA1509_14, RNA1509_1435, RNA1509_2505, RNA1509_279}
8. MligTCv3c-7348.0 Mlig032554.g5 9.33 -0.222 0.216

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TECTA Mlig032554.g5 {Length: 5350} {Pfam: von Willebrand factor type D domain [PF00094.23, score=42.8]; C8 domain [PF08742.9, score=21.9]} {Human: ENSG00000109927, TECTA, tectorin alpha, [Score=53.1, Expect=2e-06]} {Dmel: FBgn0032136, Apoltp, Apolipoprotein lipid transfer particle, [Score=81.6, Expect=1e-15]} {Smed: dd_Smed_v6_194_0_1, [Score=100, Expect=8e-22]; dd_Smed_v6_636_0_1, [Score=97.1, Expect=1e-20]} {Smes: dd_Smes_v1_41885_1_1, [Score=100, Expect=1e-21]} {UniRef: UniRef50_UPI0006B0EF8C, PREDICTED: apolipophorins-like n=2 Tax=Limulus polyphemus TaxID=6850 RepID=UPI0006B0EF8C, [Score=130, Expect=1e-28]; UniRef50_UPI000695DA18, PREDICTED: uncharacterized protein LOC106166028 n=2 Tax=Lingula unguis TaxID=7574 RepID=UPI000695DA18, [Score=129, Expect=3e-28]} {RNA1509_1181, RNA1509_230, RNA1509_4213}
9. MligTCv3c-11137.4 Mlig015871.g2, Mlig015871.g3, Mlig011948.g5, Mlig011948.g4, Mlig011948.g3, Mlig011948.g1, Mlig011948.g2, Mlig011948.g10, Mlig059336.g1, Mlig010575.g1 9.32 -0.455 0.008

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Mlig015871.g2 {Length: 367} {SignalP} {RNA1509_267}

Mlig015871.g3 {Length: 371} {SignalP} {RNA1509_267}

Mlig011948.g5 {Length: 371} {SignalP} {RNA1509_267}

Mlig011948.g4 {Length: 371} {SignalP} {RNA1509_267}

Mlig011948.g3 {Length: 359} {SignalP} {RNA1509_267}

Mlig011948.g1 {Length: 370} {SignalP} {RNA1509_267}

Mlig011948.g2 {Length: 371} {SignalP} {RNA1509_267}

Mlig011948.g10 {Length: 371} {SignalP}

Mlig059336.g1 {Length: 371} {SignalP} {RNA1509_267}

Mlig010575.g1 {Length: 371} {SignalP} {RNA1509_22192, RNA1509_24, RNA1509_2520, RNA1509_267, RNA1509_57785}
10. MligTCv3c-7765.0 Mlig033232.g1, Mlig033232.g2, Mlig033232.g3 9.17 -0.248 0.002

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Germline

Mlig033232.g1 {Length: 2627} {Pfam: Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.22, score=45.3]; RNA-binding, Nab2-type zinc finger [PF14608.4, score=24.1]} {Smed: dd_Smed_v6_80059_0_1, [RH, Score=95.5, Expect=5e-24]} {Smes: dd_Smes_v1_36259_1_3, [RH, Score=264, Expect=3e-83]} {Smans: Smp_056280.1, [RH, Score=135, Expect=2e-34]} {UniRef: UniRef50_F9W2W1, C3H-zinc finger-containing protein 1 n=1 Tax=Schmidtea mediterranea TaxID=79327 RepID=F9W2W1_SCHMD, [Score=263, Expect=6e-81]} {RNA1509_112}

Mlig033232.g2 {Length: 2622} {Pfam: Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.22, score=45.3]; RNA-binding, Nab2-type zinc finger [PF14608.4, score=24.1]} {Smed: dd_Smed_v6_80059_0_1, [RH, Score=95.5, Expect=5e-24]} {Smes: dd_Smes_v1_36259_1_3, [RH, Score=264, Expect=3e-83]} {Smans: Smp_056280.1, [RH, Score=135, Expect=2e-34]} {UniRef: UniRef50_F9W2W1, C3H-zinc finger-containing protein 1 n=1 Tax=Schmidtea mediterranea TaxID=79327 RepID=F9W2W1_SCHMD, [Score=263, Expect=6e-81]} {RNA1509_112}

Mlig033232.g3 {Length: 2628} {Pfam: Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.22, score=45.3]; RNA-binding, Nab2-type zinc finger [PF14608.4, score=24.1]} {Smed: dd_Smed_v6_80059_0_1, [RH, Score=95.5, Expect=5e-24]} {Smes: dd_Smes_v1_36259_1_3, [RH, Score=264, Expect=3e-83]} {Smans: Smp_056280.1, [RH, Score=135, Expect=2e-34]} {UniRef: UniRef50_F9W2W1, C3H-zinc finger-containing protein 1 n=1 Tax=Schmidtea mediterranea TaxID=79327 RepID=F9W2W1_SCHMD, [Score=263, Expect=6e-81]} {RNA1509_112}
11. MligTCv3c-15065.1 Mlig027481.g5, Mlig027481.g2 9.13 -0.316 0.001

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Germline

TTLL10

Mlig027481.g5 {Length: 3254} {Pfam: Tubulin-tyrosine ligase family [PF03133.13, score=82.8]; YheC/D like ATP-grasp [PF14398.4, score=45.3]; ATP-grasp in the biosynthetic pathway with Ter operon [PF15632.4, score=19.8]} {Human: ENSG00000162571, TTLL10, tubulin tyrosine ligase-like family, member 10, [Score=71.2, Expect=4e-12]} {Dmel: FBgn0026147, CG16833, , [Score=60.1, Expect=9e-09]} {Smed: dd_Smed_v6_9664_0_1, [Score=69.7, Expect=4e-12]} {Smes: dd_Smes_v1_98902_1_1, [Score=71.2, Expect=2e-12]; dd_Smes_v1_8677_1_1, [Score=70.1, Expect=5e-12]; dd_Smes_v1_32924_1_4, [Score=68.2, Expect=1e-11]} {Smans: Smp_161800.1, [Score=65.1, Expect=5e-11]} {UniRef: UniRef50_UPI000947C8EF, UPI000947C8EF related cluster n=1 Tax=unknown TaxID= RepID=UPI000947C8EF, [Score=94.4, Expect=2e-17]} {RNA1509_151, RNA1509_22724, RNA1509_6402}

Mlig027481.g2 {Length: 3254} {Pfam: Tubulin-tyrosine ligase family [PF03133.13, score=82.8]; YheC/D like ATP-grasp [PF14398.4, score=45.3]; ATP-grasp in the biosynthetic pathway with Ter operon [PF15632.4, score=19.8]} {Human: ENSG00000162571, TTLL10, tubulin tyrosine ligase-like family, member 10, [Score=71.2, Expect=4e-12]} {Dmel: FBgn0026147, CG16833, , [Score=60.1, Expect=9e-09]} {Smed: dd_Smed_v6_9664_0_1, [Score=69.7, Expect=4e-12]} {Smes: dd_Smes_v1_98902_1_1, [Score=71.2, Expect=2e-12]; dd_Smes_v1_8677_1_1, [Score=70.1, Expect=5e-12]; dd_Smes_v1_32924_1_4, [Score=68.2, Expect=1e-11]} {Smans: Smp_161800.1, [Score=65.1, Expect=5e-11]} {UniRef: UniRef50_UPI000947C8EF, UPI000947C8EF related cluster n=1 Tax=unknown TaxID= RepID=UPI000947C8EF, [Score=94.4, Expect=2e-17]} {RNA1509_14687, RNA1509_151, RNA1509_1576, RNA1509_26439, RNA1509_5565, RNA1509_897}
12. MligTCv3c-562.3860 Mlig024559.g1, Mlig024559.g3 9.05 -0.331 0.000

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Germline

GenAge

ELAVL4 exc-7

Mlig024559.g1 {Length: 2157} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.20, score=211.7]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.4, score=46.6]; Occluded RNA-recognition motif [PF16842.3, score=20.6]; RNA binding motif [PF08777.9, score=20.4]; Nup53/35/40-type RNA recognition motif [PF14605.4, score=20.1]} {Human: ENSG00000162374, ELAVL4, ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D), [RH, Score=370, Expect=1e-126]; ENSG00000107105, ELAVL2, ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B), [RH, Score=355, Expect=1e-121]; ENSG00000196361, ELAVL3, ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C), [RH, Score=354, Expect=1e-120]} {Dmel: FBgn0010263, Rbp9, RNA-binding protein 9, [RH, Score=381, Expect=1e-127]; FBgn0086675, fne, found in neurons, [RH, Score=369, Expect=1e-126]} {Celegans: WBGene00001368, exc-7, Caenorhabditis elegans Protein EXC-7 (exc-7) mRNA, complete cds., [Score=230, Expect=2e-71]} {Smed: dd_Smed_v6_8376_0_1, [RH, Score=259, Expect=2e-81]} {Smes: dd_Smes_v1_98736_1_1, [RH, Score=457, Expect=1e-160]} {Smans: Smp_194950.1, [RH, Score=340, Expect=1e-113]} {UniRef: UniRef50_A0A068XRN1, ELAVprotein 2:3:4 n=3 Tax=Hymenolepis TaxID=99110 RepID=A0A068XRN1_HYMMI, [Score=432, Expect=1e-144]; UniRef50_A0A068YFP5, ELAVprotein 2:3:4 n=6 Tax=Cyclophyllidea TaxID=6201 RepID=A0A068YFP5_ECHMU, [Score=432, Expect=1e-142]} {RNA1509_2056, RNA1509_226, RNA1509_3227, RNA1509_35023} {WURTZEL: Neural (non-ciliated) [dd_Smed_v6_8376_0_1, ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (ELAVL4)]}

Mlig024559.g3 {Length: 2157} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.20, score=211.7]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.4, score=46.6]; Occluded RNA-recognition motif [PF16842.3, score=20.6]; RNA binding motif [PF08777.9, score=20.4]; Nup53/35/40-type RNA recognition motif [PF14605.4, score=20.1]} {Human: ENSG00000162374, ELAVL4, ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D), [RH, Score=370, Expect=1e-126]; ENSG00000107105, ELAVL2, ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B), [RH, Score=355, Expect=1e-121]; ENSG00000196361, ELAVL3, ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C), [RH, Score=354, Expect=1e-120]} {Dmel: FBgn0010263, Rbp9, RNA-binding protein 9, [RH, Score=381, Expect=1e-127]; FBgn0086675, fne, found in neurons, [RH, Score=369, Expect=1e-126]} {Celegans: WBGene00001368, exc-7, Caenorhabditis elegans Protein EXC-7 (exc-7) mRNA, complete cds., [Score=230, Expect=2e-71]} {Smed: dd_Smed_v6_8376_0_1, [RH, Score=259, Expect=2e-81]} {Smes: dd_Smes_v1_98736_1_1, [RH, Score=457, Expect=1e-160]} {Smans: Smp_194950.1, [RH, Score=340, Expect=1e-113]} {UniRef: UniRef50_A0A068XRN1, ELAVprotein 2:3:4 n=3 Tax=Hymenolepis TaxID=99110 RepID=A0A068XRN1_HYMMI, [Score=432, Expect=1e-144]; UniRef50_A0A068YFP5, ELAVprotein 2:3:4 n=6 Tax=Cyclophyllidea TaxID=6201 RepID=A0A068YFP5_ECHMU, [Score=432, Expect=1e-142]} {RNA1509_16588, RNA1509_226}
13. MligTCv3c-562.8930 Mlig008469.g1 9.01 -0.290 0.000

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Germline

GenAge

ELAVL4 exc-7 Mlig008469.g1 {Length: 2145} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.20, score=208.0]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.4, score=43.7]; Occluded RNA-recognition motif [PF16842.3, score=23.0]; Nup53/35/40-type RNA recognition motif [PF14605.4, score=21.2]; Limkain b1 [PF11608.6, score=20.1]; RNA binding motif [PF08777.9, score=19.7]} {Human: ENSG00000162374, ELAVL4, ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D), [RH, Score=363, Expect=1e-123]; ENSG00000107105, ELAVL2, ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B), [RH, Score=354, Expect=1e-120]; ENSG00000196361, ELAVL3, ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C), [RH, Score=345, Expect=1e-116]} {Dmel: FBgn0010263, Rbp9, RNA-binding protein 9, [RH, Score=375, Expect=1e-124]; FBgn0086675, fne, found in neurons, [RH, Score=367, Expect=1e-125]} {Celegans: WBGene00001368, exc-7, Caenorhabditis elegans Protein EXC-7 (exc-7) mRNA, complete cds., [Score=235, Expect=6e-73]} {Smed: dd_Smed_v6_8376_0_1, [RH, Score=252, Expect=3e-78]} {Smes: dd_Smes_v1_98736_1_1, [RH, Score=447, Expect=1e-155]; dd_Smes_v1_25176_1_1, [RH, Score=429, Expect=1e-150]} {Smans: Smp_194950.1, [RH, Score=358, Expect=1e-120]} {UniRef: UniRef50_A0A068XRN1, ELAVprotein 2:3:4 n=3 Tax=Hymenolepis TaxID=99110 RepID=A0A068XRN1_HYMMI, [Score=439, Expect=1e-146]; UniRef50_A0A068YFP5, ELAVprotein 2:3:4 n=6 Tax=Cyclophyllidea TaxID=6201 RepID=A0A068YFP5_ECHMU, [Score=435, Expect=1e-143]} {RNA1509_10150, RNA1509_10693, RNA1509_11022, RNA1509_1971, RNA1509_25654, RNA1509_5287} {WURTZEL: Neural (non-ciliated) [dd_Smed_v6_8376_0_1, ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (ELAVL4)]}
14. MligTCv3c-15493.8 Mlig008783.g2 9.01 -0.246 0.004

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Germline

TUBA1B tba-2 Mlig008783.g2 {Length: 2307} {Pfam: Tubulin/FtsZ family, GTPase domain [PF00091.23, score=222.1]; Tubulin C-terminal domain [PF03953.15, score=168.3]} {Human: ENSG00000123416, TUBA1B, tubulin, alpha 1b, [Score=672, Expect=0.0]; ENSG00000167553, TUBA1C, tubulin, alpha 1c, [Score=671, Expect=0.0]; ENSG00000167552, TUBA1A, tubulin, alpha 1a, [Score=670, Expect=0.0]; ENSG00000198033, TUBA3C, tubulin, alpha 3c, [Score=669, Expect=0.0]; ENSG00000075886, TUBA3D, tubulin, alpha 3d, [Score=669, Expect=0.0]; ENSG00000152086, TUBA3E, tubulin, alpha 3e, [Score=661, Expect=0.0]; ENSG00000127824, TUBA4A, tubulin, alpha 4a, [Score=661, Expect=0.0]; ENSG00000183785, TUBA8, tubulin, alpha 8, [Score=654, Expect=0.0]} {Dmel: FBgn0003884, alphaTub84B, alpha-Tubulin at 84B, [Score=667, Expect=0.0]; FBgn0003886, alphaTub85E, alpha-Tubulin at 85E, [Score=665, Expect=0.0]; FBgn0003885, alphaTub84D, alpha-Tubulin at 84D, [Score=664, Expect=0.0]} {Celegans: WBGene00006529, tba-2, Caenorhabditis elegans Protein TBA-2 (tba-2) mRNA, complete cds., [Score=671, Expect=0.0]} {Smed: dd_Smed_v6_10947_0_2, [Score=672, Expect=0.0]; dd_Smed_v6_38_0_1, [Score=665, Expect=0.0]; dd_Smed_v6_648_0_1, [Score=647, Expect=0.0]; dd_Smed_v6_124_0_1, [Score=646, Expect=0.0]} {Smes: dd_Smes_v1_88063_1_1, [Score=672, Expect=0.0]; dd_Smes_v1_40349_1_2, [Score=665, Expect=0.0]; dd_Smes_v1_40349_5_1, [Score=660, Expect=0.0]; dd_Smes_v1_42306_1_1, [Score=646, Expect=0.0]; dd_Smes_v1_36083_2_1, [Score=639, Expect=0.0]} {Smans: Smp_103790.1, [Score=670, Expect=0.0]; Smp_090120.1, [Score=665, Expect=0.0]; Smp_016780.1, [Score=660, Expect=0.0]; Smp_103140.1, [Score=647, Expect=0.0]} {UniRef: UniRef50_W6UDI6, Tubulin alpha-1C chain n=3 Tax=Bilateria TaxID=33213 RepID=W6UDI6_ECHGR, [Score=677, Expect=0.0]; UniRef50_P68363, Tubulin alpha-1B chain n=315 Tax=Eukaryota TaxID=2759 RepID=TBA1B_HUMAN, [Score=672, Expect=0.0]; UniRef50_P34690, Tubulin alpha-2 chain n=151 Tax=root TaxID=1 RepID=TBA2_CAEEL, [Score=671, Expect=0.0]} {RNA1509_107, RNA1509_11579, RNA1509_1629, RNA1509_38054, RNA1509_566} {WURTZEL: Neoblast [dd_Smed_v6_648_0_1, NA]}
15. MligTCv3c-4998.1 Mlig015594.g2, Mlig000187.g2 8.93 0.012 0.960

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COL6A6; VWA2 mup-4

Mlig015594.g2 {Length: 18797} {Pfam: von Willebrand factor type A domain [PF00092.26, score=109.8]; von Willebrand factor type A domain [PF13519.4, score=53.2]; Transcription factor TFIID (or TATA-binding protein, TBP) [PF00352.19, score=38.0]; Protein of unknown function (DUF3203) [PF11462.6, score=22.8]; Vacuolar sorting protein 39 domain 1 [PF10366.7, score=22.2]} {Human: ENSG00000206384, COL6A6, collagen, type VI, alpha 6, [Score=90.1, Expect=1e-16]} {Celegans: WBGene00003497, mup-4, Caenorhabditis elegans Protein MUP-4 (mup-4) mRNA, complete cds., [Score=83.6, Expect=4e-15]} {Smed: dd_Smed_v6_1071_0_1, [RH, Score=120, Expect=5e-27]} {Smes: dd_Smes_v1_40895_1_1, [Score=121, Expect=2e-27]} {UniRef: UniRef50_UPI000697BA2F, PREDICTED: uncharacterized protein LOC106168379 n=1 Tax=Lingula unguis TaxID=7574 RepID=UPI000697BA2F, [Score=113, Expect=1e-21]} {RNA1509_14864, RNA1509_167, RNA1509_20136, RNA1509_204, RNA1509_21996, RNA1509_25051, RNA1509_27667, RNA1509_28098, RNA1509_31948, RNA1509_32716, RNA1509_35430, RNA1509_3544, RNA1509_39504, RNA1509_43964, RNA1509_45354}

Mlig000187.g2 {Length: 9745} {SignalP} {Pfam: von Willebrand factor type A domain [PF00092.26, score=327.0]; von Willebrand factor type A domain [PF13519.4, score=159.4]} {Human: ENSG00000165816, VWA2, von Willebrand factor A domain containing 2, [RH, Score=83.6, Expect=2e-15]} {Celegans: WBGene00003497, mup-4, Caenorhabditis elegans Protein MUP-4 (mup-4) mRNA, complete cds., [Score=80.5, Expect=1e-14]} {Smed: dd_Smed_v6_1071_0_1, [RH, Score=116, Expect=5e-26]} {Smes: dd_Smes_v1_40895_1_1, [RH, Score=119, Expect=2e-27]} {UniRef: UniRef50_UPI000698D0C7, PREDICTED: uncharacterized protein LOC106179416, partial n=1 Tax=Lingula unguis TaxID=7574 RepID=UPI000698D0C7, [Score=106, Expect=4e-20]; UniRef50_UPI000697BA2F, PREDICTED: uncharacterized protein LOC106168379 n=1 Tax=Lingula unguis TaxID=7574 RepID=UPI000697BA2F, [Score=106, Expect=4e-20]} {RNA1509_13006, RNA1509_1372, RNA1509_16525, RNA1509_1899, RNA1509_28144, RNA1509_39641, RNA1509_4016, RNA1509_40212, RNA1509_57547}
16. MligTCv3c-4403.0 Mlig027085.g2 8.9 0.529 0.004

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MUC2 Mlig027085.g2 {Length: 18778} {Pfam: von Willebrand factor type D domain [PF00094.23, score=64.7]; C8 domain [PF08742.9, score=27.6]} {Human: ENSG00000198788, MUC2, mucin 2, oligomeric mucus/gel-forming, [Score=69.7, Expect=9e-12]; ENSG00000110799, VWF, von Willebrand factor, [Score=67.8, Expect=3e-11]; ENSG00000090920, FCGBP, Fc fragment of IgG binding protein, [Score=67.8, Expect=4e-11]} {Dmel: FBgn0032136, Apoltp, Apolipoprotein lipid transfer particle, [Score=166, Expect=4e-43]} {Smed: dd_Smed_v6_194_0_1, [Score=172, Expect=3e-45]} {Smes: dd_Smes_v1_41885_1_1, [Score=171, Expect=8e-45]} {UniRef: UniRef50_UPI0003F05BF2, PREDICTED: apolipophorins-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F05BF2, [Score=214, Expect=5e-57]; UniRef50_UPI0005C37A69, PREDICTED: apolipophorins-like isoform X1 n=1 Tax=Crassostrea gigas TaxID=29159 RepID=UPI0005C37A69, [Score=212, Expect=1e-57]} {RNA1509_15052, RNA1509_17181, RNA1509_23, RNA1509_3512, RNA1509_4187, RNA1509_4382, RNA1509_7930, RNA1509_9014, RNA1509_935}
17. MligTCv3c-14441.1 Mlig025005.g1 8.85 -0.263 0.009

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Germline

Mlig025005.g1 {Length: 1269} {Pfam: Staufen C-terminal domain [PF16482.3, score=29.4]} {UniRef: UniRef50_A0A0M4HHD3, TARBP2 n=1 Tax=Macrostomum lignano TaxID=282301 RepID=A0A0M4HHD3_9PLAT, [Score=300, Expect=1e-101]} {RNA1509_2242, RNA1509_26241, RNA1509_2973, RNA1509_323, RNA1509_346}
18. MligTCv3c-11703.0 Mlig018316.g3 8.82 -0.026 0.888

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GenAge

ACHE ace-1 Mlig018316.g3 {Length: 14908} {Pfam: Carboxylesterase family [PF00135.26, score=2733.7]; alpha/beta hydrolase fold [PF07859.11, score=124.5]} {Human: ENSG00000087085, ACHE, acetylcholinesterase, [Score=233, Expect=6e-64]} {Dmel: FBgn0027584, CG4757, , [RH, Score=181, Expect=4e-47]} {Celegans: WBGene00000035, ace-1, Caenorhabditis elegans Protein ACE-1 (ace-1) mRNA, complete cds., [Score=199, Expect=4e-53]} {Smed: dd_Smed_v6_10334_0_1, [Score=187, Expect=7e-49]} {Smes: dd_Smes_v1_43502_1_1, [Score=187, Expect=9e-49]} {Smans: Smp_154600.1, [Score=184, Expect=5e-48]} {UniRef: UniRef50_K1S0A7, Deleted in malignant brain tumors 1 protein n=1 Tax=Crassostrea gigas TaxID=29159 RepID=K1S0A7_CRAGI, [Score=387, Expect=1e-105]} {RNA1509_1156, RNA1509_15426, RNA1509_18645, RNA1509_25748, RNA1509_38830, RNA1509_52613, RNA1509_54376, RNA1509_55451, RNA1509_57128, RNA1509_6237, RNA1509_82, RNA1509_8738, RNA1509_8879} {WURTZEL: Neural (non-ciliated) [dd_Smed_v6_10334_0_1, butyrylcholinesterase (BCHE)]}
19. MligTCv3c-15065.0 Mlig027481.g1 8.8 -0.421 0.000

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Germline

TTLL10 Mlig027481.g1 {Length: 3233} {Pfam: Tubulin-tyrosine ligase family [PF03133.13, score=78.7]; YheC/D like ATP-grasp [PF14398.4, score=43.3]} {Human: ENSG00000162571, TTLL10, tubulin tyrosine ligase-like family, member 10, [Score=72.0, Expect=2e-12]} {Smed: dd_Smed_v6_9664_0_1, [Score=69.3, Expect=7e-12]} {Smes: dd_Smes_v1_98902_1_1, [Score=70.5, Expect=3e-12]; dd_Smes_v1_8677_1_1, [Score=69.3, Expect=8e-12]; dd_Smes_v1_32924_1_4, [Score=67.0, Expect=3e-11]} {Smans: Smp_161800.1, [Score=63.2, Expect=3e-10]} {UniRef: UniRef50_UPI000947C8EF, UPI000947C8EF related cluster n=1 Tax=unknown TaxID= RepID=UPI000947C8EF, [Score=92.8, Expect=9e-17]} {RNA1509_12649, RNA1509_13510, RNA1509_151, RNA1509_16971, RNA1509_18392, RNA1509_2185, RNA1509_2713, RNA1509_55095, RNA1509_7036, RNA1509_9184}
20. MligTCv3c-11703.1 Mlig018316.g1 8.77 -0.050 0.800

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GenAge

ACHE ace-1 Mlig018316.g1 {Length: 11517} {SignalP} {Pfam: Carboxylesterase family [PF00135.26, score=2076.9]; alpha/beta hydrolase fold [PF07859.11, score=105.7]} {Human: ENSG00000087085, ACHE, acetylcholinesterase, [Score=233, Expect=3e-64]} {Dmel: FBgn0027584, CG4757, , [RH, Score=179, Expect=7e-47]} {Celegans: WBGene00000035, ace-1, Caenorhabditis elegans Protein ACE-1 (ace-1) mRNA, complete cds., [Score=203, Expect=2e-54]} {Smed: dd_Smed_v6_10334_0_1, [Score=190, Expect=6e-50]} {Smes: dd_Smes_v1_43502_1_1, [Score=190, Expect=7e-50]} {Smans: Smp_154600.1, [Score=187, Expect=3e-49]} {UniRef: UniRef50_UPI0005EDEBFA, PREDICTED: thyroglobulin n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=UPI0005EDEBFA, [Score=320, Expect=9e-87]} {RNA1509_15177, RNA1509_27104, RNA1509_28859, RNA1509_3072, RNA1509_3197, RNA1509_39643, RNA1509_4986, RNA1509_50347, RNA1509_6008, RNA1509_82, RNA1509_9894} {WURTZEL: Neural (non-ciliated) [dd_Smed_v6_10334_0_1, butyrylcholinesterase (BCHE)]}
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