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Found 201 results for path Up-Up-Down. Showing entries 1-20.

Graph Cluster Transcripts Mean logCPM logFC M26/M2 FDR M26/M2 Classification Human genes C.elegans genes Annotation
1. MligTCv3c-562.923 Mlig999008.g1 15.73 0.558 0.001

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Mlig999008.g1 {Length: 867} {MITOS: rrnL, l-rRNA} {NoTransDecoderORF} {RNA1509_10, RNA1509_131, RNA1509_2, RNA1509_2023, RNA1509_309, RNA1509_311, RNA1509_37702, RNA1509_43660, RNA1509_46227, RNA1509_48581, RNA1509_565, RNA1509_892}
2. MligTCv3c-10346.0 Mlig999016.g1 9.23 0.415 0.032

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Mlig999016.g1 {Length: 438} {MITOS: nad6, NADH dehydrogenase subunit 6} {NoTransDecoderORF} {RNA1509_281}
3. MligTCv3c-11137.0 Mlig032591.g1 9.01 -0.353 0.035

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Mlig032591.g1 {Length: 396} {NoTransDecoderORF} {RNA1509_2793}
4. MligTCv3c-11137.1 Mlig032591.g2 8.96 -0.360 0.028

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Mlig032591.g2 {Length: 401} {NoTransDecoderORF} {RNA1509_2793, RNA1509_38748}
5. MligTCv3c-4482.0 Mlig999023.g1 8.49 0.266 0.475

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Mlig999023.g1 {Length: 891} {MITOS: nad2, NADH dehydrogenase subunit 2} {NoTransDecoderORF} {RNA1509_10473, RNA1509_22338, RNA1509_4192}
6. MligTCv3c-10289.1 Mlig019311.g6 7.24 0.414 0.000

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PRSS12 svh-1 Mlig019311.g6 {Length: 4855} {SignalP} {Pfam: Trypsin [PF00089.24, score=213.7]; Scavenger receptor cysteine-rich domain [PF00530.16, score=182.3]; Low-density lipoprotein receptor domain class A [PF00057.16, score=91.1]; Kringle domain [PF00051.16, score=52.6]; Scavenger receptor cysteine-rich domain [PF15494.4, score=45.7]; Lectin C-type domain [PF00059.19, score=28.5]} {Human: ENSG00000164099, PRSS12, protease, serine, 12 (neurotrypsin, motopsin), [Score=236, Expect=1e-63]} {Dmel: FBgn0023479, Tequila, Tequila, [RH, Score=287, Expect=1e-78]} {Celegans: WBGene00006620, svh-1, Caenorhabditis elegans Protein SVH-1 (svh-1) mRNA, complete cds., [RH, Score=183, Expect=7e-47]} {Smed: dd_Smed_v6_790_0_1, [Score=533, Expect=1e-166]; dd_Smed_v6_1926_0_1, [Score=520, Expect=1e-162]} {Smes: dd_Smes_v1_98833_1_1, [Score=531, Expect=1e-166]; dd_Smes_v1_78285_1_1, [Score=520, Expect=1e-161]} {Smans: Smp_103680.1, [Score=156, Expect=4e-42]} {UniRef: UniRef50_UPI0006B07C20, PREDICTED: neurotrypsin-like n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI0006B07C20, [Score=394, Expect=1e-115]} {RNA1509_15948, RNA1509_22967, RNA1509_337, RNA1509_41480} {WURTZEL: Gamma neoblasts [dd_Smed_v6_790_0_1, protease, serine, 12 (neurotrypsin, motopsin) (PRSS12)]} {WURTZEL: Gut [dd_Smed_v6_1926_0_1, protease, serine, 12 (neurotrypsin, motopsin) (PRSS12)]}
7. MligTCv3c-16938.2 Mlig027873.g2, Mlig057600.g1, Mlig028698.g1 6.95 0.479 0.000

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NPC1 ncr-1

Mlig027873.g2 {Length: 5120} {TRANSSPLICED} {SignalP} {Pfam: Patched family [PF02460.16, score=275.4]; Niemann-Pick C1 N terminus [PF16414.3, score=206.0]; Sterol-sensing domain of SREBP cleavage-activation [PF12349.6, score=182.3]; MMPL family [PF03176.13, score=25.1]} {Human: ENSG00000141458, NPC1, Niemann-Pick disease, type C1, [RH, Score=960, Expect=0.0]} {Dmel: FBgn0024320, Npc1a, Niemann-Pick type C-1a, [RH, Score=903, Expect=0.0]} {Celegans: WBGene00003561, ncr-1, Caenorhabditis elegans Protein NCR-1 (ncr-1) mRNA, complete cds., [RH, Score=412, Expect=1e-122]} {Smed: dd_Smed_v6_5175_0_1, [RH, Score=996, Expect=0.0]} {Smes: dd_Smes_v1_42945_1_1, [RH, Score=996, Expect=0.0]} {Smans: Smp_039130.1, [RH, Score=409, Expect=1e-125]} {UniRef: UniRef50_UPI0003597CF5, PREDICTED: Niemann-Pick C1 protein-like n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI0003597CF5, [Score=1043, Expect=0.0]; UniRef50_UPI0006981E36, PREDICTED: Niemann-Pick C1 protein-like isoform X1 n=2 Tax=Lingula unguis TaxID=7574 RepID=UPI0006981E36, [Score=1039, Expect=0.0]} {RNA1509_18504, RNA1509_3726, RNA1509_3957, RNA1509_53572}

Mlig057600.g1 {Length: 477} {TRANSSPLICED} {SignalP} {Pfam: Patched family [PF02460.16, score=275.4]; Niemann-Pick C1 N terminus [PF16414.3, score=206.0]; Sterol-sensing domain of SREBP cleavage-activation [PF12349.6, score=182.3]; MMPL family [PF03176.13, score=25.1]} {Human: ENSG00000141458, NPC1, Niemann-Pick disease, type C1, [RH, Score=960, Expect=0.0]} {Dmel: FBgn0024320, Npc1a, Niemann-Pick type C-1a, [RH, Score=903, Expect=0.0]} {Celegans: WBGene00003561, ncr-1, Caenorhabditis elegans Protein NCR-1 (ncr-1) mRNA, complete cds., [RH, Score=412, Expect=1e-122]} {Smed: dd_Smed_v6_5175_0_1, [RH, Score=996, Expect=0.0]} {Smes: dd_Smes_v1_42945_1_1, [RH, Score=996, Expect=0.0]} {Smans: Smp_039130.1, [RH, Score=409, Expect=1e-125]} {UniRef: UniRef50_UPI0003597CF5, PREDICTED: Niemann-Pick C1 protein-like n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI0003597CF5, [Score=1043, Expect=0.0]; UniRef50_UPI0006981E36, PREDICTED: Niemann-Pick C1 protein-like isoform X1 n=2 Tax=Lingula unguis TaxID=7574 RepID=UPI0006981E36, [Score=1039, Expect=0.0]} {RNA1509_3957}

Mlig028698.g1 {Length: 3701} {SignalP} {Pfam: Patched family [PF02460.16, score=275.4]; Niemann-Pick C1 N terminus [PF16414.3, score=206.0]; Sterol-sensing domain of SREBP cleavage-activation [PF12349.6, score=182.3]; MMPL family [PF03176.13, score=25.1]} {Human: ENSG00000141458, NPC1, Niemann-Pick disease, type C1, [RH, Score=960, Expect=0.0]} {Dmel: FBgn0024320, Npc1a, Niemann-Pick type C-1a, [RH, Score=903, Expect=0.0]} {Celegans: WBGene00003561, ncr-1, Caenorhabditis elegans Protein NCR-1 (ncr-1) mRNA, complete cds., [RH, Score=412, Expect=1e-122]} {Smed: dd_Smed_v6_5175_0_1, [RH, Score=996, Expect=0.0]} {Smes: dd_Smes_v1_42945_1_1, [RH, Score=996, Expect=0.0]} {Smans: Smp_039130.1, [RH, Score=409, Expect=1e-125]} {UniRef: UniRef50_UPI0003597CF5, PREDICTED: Niemann-Pick C1 protein-like n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI0003597CF5, [Score=1043, Expect=0.0]; UniRef50_UPI0006981E36, PREDICTED: Niemann-Pick C1 protein-like isoform X1 n=2 Tax=Lingula unguis TaxID=7574 RepID=UPI0006981E36, [Score=1039, Expect=0.0]} {RNA1509_34016, RNA1509_3726}
8. MligTCv3c-10289.0 Mlig019311.g4 6.72 0.397 0.000

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PRSS12 svh-1 Mlig019311.g4 {Length: 4845} {SignalP} {Pfam: Trypsin [PF00089.24, score=213.6]; Scavenger receptor cysteine-rich domain [PF00530.16, score=181.3]; Low-density lipoprotein receptor domain class A [PF00057.16, score=90.9]; Kringle domain [PF00051.16, score=52.6]; Scavenger receptor cysteine-rich domain [PF15494.4, score=46.8]; Lectin C-type domain [PF00059.19, score=27.1]} {Human: ENSG00000164099, PRSS12, protease, serine, 12 (neurotrypsin, motopsin), [Score=233, Expect=6e-63]} {Dmel: FBgn0023479, Tequila, Tequila, [RH, Score=286, Expect=1e-78]} {Celegans: WBGene00006620, svh-1, Caenorhabditis elegans Protein SVH-1 (svh-1) mRNA, complete cds., [RH, Score=183, Expect=7e-47]} {Smed: dd_Smed_v6_790_0_1, [Score=531, Expect=1e-166]; dd_Smed_v6_1926_0_1, [Score=521, Expect=1e-162]} {Smes: dd_Smes_v1_98833_1_1, [Score=530, Expect=1e-165]; dd_Smes_v1_78285_1_1, [Score=520, Expect=1e-162]} {Smans: Smp_103680.1, [Score=156, Expect=5e-42]} {UniRef: UniRef50_UPI0006B07C20, PREDICTED: neurotrypsin-like n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI0006B07C20, [Score=397, Expect=1e-116]} {RNA1509_26720, RNA1509_337, RNA1509_40533, RNA1509_46108, RNA1509_49914} {WURTZEL: Gamma neoblasts [dd_Smed_v6_790_0_1, protease, serine, 12 (neurotrypsin, motopsin) (PRSS12)]} {WURTZEL: Gut [dd_Smed_v6_1926_0_1, protease, serine, 12 (neurotrypsin, motopsin) (PRSS12)]}
9. MligTCv3c-9657.1 Mlig027938.g3, Mlig027938.g1 6.7 0.062 0.401

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ELOVL6 elo-3

Mlig027938.g3 {Length: 2331} {Pfam: GNS1/SUR4 family [PF01151.16, score=236.4]} {Human: ENSG00000170522, ELOVL6, ELOVL family member 6, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast), [RH, Score=212, Expect=6e-67]} {Dmel: FBgn0260960, Baldspot, Baldspot, [RH, Score=262, Expect=4e-86]} {Celegans: WBGene00001241, elo-3, Caenorhabditis elegans Protein ELO-3, isoform a (elo-3) mRNA, complete cds., [RH, Score=233, Expect=5e-75]} {Smed: dd_Smed_v6_523_0_1, [RH, Score=248, Expect=6e-81]} {Smes: dd_Smes_v1_8666_1_1, [RH, Score=249, Expect=5e-81]} {Smans: Smp_051810.1, [Score=65.1, Expect=2e-12]} {UniRef: UniRef50_R7UTT0, Elongation of very long chain fatty acids protein n=7 Tax=Bilateria TaxID=33213 RepID=R7UTT0_CAPTE, [Score=287, Expect=3e-94]} {RNA1509_1174, RNA1509_9104}

Mlig027938.g1 {Length: 2285} {Pfam: GNS1/SUR4 family [PF01151.16, score=236.4]} {Human: ENSG00000170522, ELOVL6, ELOVL family member 6, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast), [RH, Score=212, Expect=6e-67]} {Dmel: FBgn0260960, Baldspot, Baldspot, [RH, Score=262, Expect=4e-86]} {Celegans: WBGene00001241, elo-3, Caenorhabditis elegans Protein ELO-3, isoform a (elo-3) mRNA, complete cds., [RH, Score=233, Expect=5e-75]} {Smed: dd_Smed_v6_523_0_1, [RH, Score=248, Expect=6e-81]} {Smes: dd_Smes_v1_8666_1_1, [RH, Score=249, Expect=5e-81]} {Smans: Smp_051810.1, [Score=65.1, Expect=2e-12]} {UniRef: UniRef50_R7UTT0, Elongation of very long chain fatty acids protein n=7 Tax=Bilateria TaxID=33213 RepID=R7UTT0_CAPTE, [Score=287, Expect=3e-94]} {RNA1509_33742, RNA1509_9104} {WURTZEL: Epidermal progenitors (late) [dd_Smed_v6_523_0_1, ELOVL fatty acid elongase 3 (ELOVL3)]}
10. MligTCv3c-16938.0 Mlig020273.g2 6.33 0.363 0.000

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NPC1 ncr-1 Mlig020273.g2 {Length: 5536} {TRANSSPLICED} {SignalP} {Pfam: Patched family [PF02460.16, score=275.8]; Niemann-Pick C1 N terminus [PF16414.3, score=206.0]; Sterol-sensing domain of SREBP cleavage-activation [PF12349.6, score=182.9]; MMPL family [PF03176.13, score=25.4]} {Human: ENSG00000141458, NPC1, Niemann-Pick disease, type C1, [RH, Score=962, Expect=0.0]} {Dmel: FBgn0024320, Npc1a, Niemann-Pick type C-1a, [RH, Score=902, Expect=0.0]} {Celegans: WBGene00003561, ncr-1, Caenorhabditis elegans Protein NCR-1 (ncr-1) mRNA, complete cds., [RH, Score=413, Expect=1e-122]} {Smed: dd_Smed_v6_5175_0_1, [RH, Score=993, Expect=0.0]} {Smes: dd_Smes_v1_42945_1_1, [RH, Score=991, Expect=0.0]} {Smans: Smp_039130.1, [RH, Score=410, Expect=1e-125]} {UniRef: UniRef50_UPI0003597CF5, PREDICTED: Niemann-Pick C1 protein-like n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI0003597CF5, [Score=1044, Expect=0.0]; UniRef50_UPI0006981E36, PREDICTED: Niemann-Pick C1 protein-like isoform X1 n=2 Tax=Lingula unguis TaxID=7574 RepID=UPI0006981E36, [Score=1041, Expect=0.0]} {RNA1509_3726, RNA1509_40528}
11. MligTCv3c-11904.0 Mlig016076.g2, Mlig002239.g2, Mlig024369.g2 6.03 -0.151 0.010

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Germline

GenAge

PPP3CA; PPP3CB tax-6

Mlig016076.g2 {Length: 3433} {Pfam: Calcineurin-like phosphoesterase [PF00149.26, score=125.6]} {Human: ENSG00000138814, PPP3CA, protein phosphatase 3, catalytic subunit, alpha isozyme, [RH, Score=768, Expect=0.0]; ENSG00000107758, PPP3CB, protein phosphatase 3, catalytic subunit, beta isozyme, [RH, Score=754, Expect=0.0]} {Dmel: FBgn0011826, Pp2B-14D, Protein phosphatase 2B at 14D, [RH, Score=752, Expect=0.0]; FBgn0030758, CanA-14F, Calcineurin A at 14F, [RH, Score=746, Expect=0.0]} {Celegans: WBGene00006527, tax-6, Caenorhabditis elegans Protein TAX-6, isoform b (tax-6) mRNA, complete cds., [RH, Score=707, Expect=0.0]} {Smed: dd_Smed_v6_2045_0_1, [RH, Score=644, Expect=0.0]; dd_Smed_v6_5378_0_1, [RH, Score=626, Expect=0.0]} {Smes: dd_Smes_v1_13376_1_2, [RH, Score=766, Expect=0.0]; dd_Smes_v1_25865_2_1, [RH, Score=728, Expect=0.0]} {Smans: Smp_126260.1, [RH, Score=720, Expect=0.0]} {UniRef: UniRef50_UPI0004CD4A12, PREDICTED: uncharacterized protein LOC103576807 isoform X1 n=5 Tax=Microplitis demolitor TaxID=69319 RepID=UPI0004CD4A12, [Score=771, Expect=0.0]} {RNA1509_7441}

Mlig002239.g2 {Length: 3311} {Pfam: Calcineurin-like phosphoesterase [PF00149.26, score=125.6]} {Human: ENSG00000138814, PPP3CA, protein phosphatase 3, catalytic subunit, alpha isozyme, [RH, Score=768, Expect=0.0]; ENSG00000107758, PPP3CB, protein phosphatase 3, catalytic subunit, beta isozyme, [RH, Score=753, Expect=0.0]} {Dmel: FBgn0011826, Pp2B-14D, Protein phosphatase 2B at 14D, [RH, Score=753, Expect=0.0]; FBgn0030758, CanA-14F, Calcineurin A at 14F, [RH, Score=746, Expect=0.0]} {Celegans: WBGene00006527, tax-6, Caenorhabditis elegans Protein TAX-6, isoform b (tax-6) mRNA, complete cds., [RH, Score=708, Expect=0.0]} {Smed: dd_Smed_v6_2045_0_1, [RH, Score=644, Expect=0.0]; dd_Smed_v6_5378_0_1, [RH, Score=627, Expect=0.0]} {Smes: dd_Smes_v1_13376_1_2, [RH, Score=766, Expect=0.0]; dd_Smes_v1_25865_2_1, [RH, Score=729, Expect=0.0]} {Smans: Smp_126260.1, [RH, Score=721, Expect=0.0]} {UniRef: UniRef50_UPI0004CD4A12, PREDICTED: uncharacterized protein LOC103576807 isoform X1 n=5 Tax=Microplitis demolitor TaxID=69319 RepID=UPI0004CD4A12, [Score=768, Expect=0.0]; UniRef50_P63328, Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform n=518 Tax=Opisthokonta TaxID=33154 RepID=PP2BA_MOUSE, [Score=762, Expect=0.0]} {RNA1509_7441}

Mlig024369.g2 {Length: 3271} {Pfam: Calcineurin-like phosphoesterase [PF00149.26, score=125.4]} {Human: ENSG00000107758, PPP3CB, protein phosphatase 3, catalytic subunit, beta isozyme, [RH, Score=687, Expect=0.0]} {Dmel: FBgn0011826, Pp2B-14D, Protein phosphatase 2B at 14D, [Score=689, Expect=0.0]; FBgn0030758, CanA-14F, Calcineurin A at 14F, [Score=682, Expect=0.0]; FBgn0010015, CanA1, Calcineurin A1, [Score=662, Expect=0.0]} {Celegans: WBGene00006527, tax-6, Caenorhabditis elegans Protein TAX-6, isoform b (tax-6) mRNA, complete cds., [RH, Score=672, Expect=0.0]} {Smed: dd_Smed_v6_9037_0_1, [RH, Score=556, Expect=0.0]} {Smes: dd_Smes_v1_13376_1_2, [Score=701, Expect=0.0]; dd_Smes_v1_25865_2_1, [Score=672, Expect=0.0]} {Smans: Smp_126260.1, [Score=662, Expect=0.0]} {UniRef: UniRef50_P63328, Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform n=518 Tax=Opisthokonta TaxID=33154 RepID=PP2BA_MOUSE, [Score=704, Expect=0.0]; UniRef50_UPI0004CD4A12, PREDICTED: uncharacterized protein LOC103576807 isoform X1 n=5 Tax=Microplitis demolitor TaxID=69319 RepID=UPI0004CD4A12, [Score=704, Expect=0.0]; UniRef50_UPI00051B7DAA, PREDICTED: serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform n=3 Tax=Cuculus canorus TaxID=55661 RepID=UPI00051B7DAA, [Score=697, Expect=0.0]} {RNA1509_43633, RNA1509_7441}
12. MligTCv3c-13253.2 Mlig021307.g9, Mlig021307.g8 6.01 0.964 0.000

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Mlig021307.g9 {Length: 1046} {RNA1509_2738}

Mlig021307.g8 {Length: 1046} {RNA1509_2738}
13. MligTCv3c-9657.0 Mlig027938.g2 5.83 0.083 0.332

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ELOVL6 elo-3 Mlig027938.g2 {Length: 2364} {Pfam: GNS1/SUR4 family [PF01151.16, score=237.5]} {Human: ENSG00000170522, ELOVL6, ELOVL family member 6, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast), [RH, Score=209, Expect=7e-66]} {Dmel: FBgn0260960, Baldspot, Baldspot, [RH, Score=259, Expect=5e-85]} {Celegans: WBGene00001241, elo-3, Caenorhabditis elegans Protein ELO-3, isoform a (elo-3) mRNA, complete cds., [RH, Score=235, Expect=1e-75]} {Smed: dd_Smed_v6_523_0_1, [RH, Score=249, Expect=2e-81]} {Smes: dd_Smes_v1_8666_1_1, [RH, Score=250, Expect=1e-81]} {Smans: Smp_051810.1, [Score=66.2, Expect=8e-13]} {UniRef: UniRef50_R7UTT0, Elongation of very long chain fatty acids protein n=7 Tax=Bilateria TaxID=33213 RepID=R7UTT0_CAPTE, [Score=288, Expect=8e-95]} {RNA1509_11773, RNA1509_8521, RNA1509_9104} {WURTZEL: Epidermal progenitors (late) [dd_Smed_v6_523_0_1, ELOVL fatty acid elongase 3 (ELOVL3)]}
14. MligTCv3c-562.3945 Mlig003997.g5, Mlig003997.g4, Mlig010810.g1 5.79 -0.086 0.460

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ELAVL2; SDS T01H8.2

Mlig003997.g5 {Length: 6938} {TRANSSPLICED} {tRNA: Pseudo(CAC),euk, score=20.86} {Pfam: Pyridoxal-phosphate dependent enzyme [PF00291.23, score=176.4]} {Human: ENSG00000135094, SDS, serine dehydratase, [Score=107, Expect=1e-25]; ENSG00000139410, SDSL, serine dehydratase-like, [Score=102, Expect=2e-23]} {Celegans: WBGene00011353, T01H8.2, Caenorhabditis elegans Protein T01H8.2 (T01H8.2) mRNA, complete cds., [Score=47.4, Expect=1e-05]} {Smed: dd_Smed_v6_2842_0_1, [Score=134, Expect=1e-33]} {Smes: dd_Smes_v1_40234_2_1, [Score=134, Expect=1e-33]} {Smans: Smp_137330.1, [Score=144, Expect=2e-37]} {UniRef: UniRef50_G7YIB4, Serine dehydratase-like (Fragment) n=1 Tax=Clonorchis sinensis TaxID=79923 RepID=G7YIB4_CLOSI, [Score=171, Expect=1e-43]} {RNA1509_39825, RNA1509_45069, RNA1509_52581, RNA1509_5868, RNA1509_9071}

Mlig003997.g4 {Length: 6794} {TRANSSPLICED} {tRNA: Pseudo(CAC),euk, score=27.96} {Pfam: Pyridoxal-phosphate dependent enzyme [PF00291.23, score=174.6]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.20, score=122.1]} {Human: ENSG00000107105, ELAVL2, ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B), [Score=154, Expect=1e-40]; ENSG00000162374, ELAVL4, ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D), [Score=152, Expect=5e-40]; ENSG00000066044, ELAVL1, ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R), [Score=151, Expect=1e-39]} {Dmel: FBgn0086675, fne, found in neurons, [Score=155, Expect=1e-41]; FBgn0010263, Rbp9, RNA-binding protein 9, [Score=154, Expect=4e-40]} {Celegans: WBGene00001368, exc-7, Caenorhabditis elegans Protein EXC-7 (exc-7) mRNA, complete cds., [Score=143, Expect=1e-36]} {Smed: dd_Smed_v6_11311_0_2, [Score=139, Expect=2e-35]; dd_Smed_v6_2842_0_2, [Score=139, Expect=5e-34]; dd_Smed_v6_8376_0_1, [Score=135, Expect=2e-33]} {Smes: dd_Smes_v1_98736_1_1, [Score=142, Expect=6e-36]; dd_Smes_v1_40234_2_1, [Score=140, Expect=5e-34]; dd_Smes_v1_30831_1_3, [Score=139, Expect=2e-35]; dd_Smes_v1_33518_2_1, [Score=135, Expect=3e-33]} {Smans: Smp_137330.1, [RH, Score=156, Expect=1e-39]} {UniRef: UniRef50_G7YIB4, Serine dehydratase-like (Fragment) n=1 Tax=Clonorchis sinensis TaxID=79923 RepID=G7YIB4_CLOSI, [Score=171, Expect=1e-41]} {RNA1509_17790, RNA1509_48316, RNA1509_5868} {WURTZEL: Neural (non-ciliated) [dd_Smed_v6_8376_0_1, ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (ELAVL4)]}

Mlig010810.g1 {Length: 6981} {TRANSSPLICED} {tRNA: Pseudo(CAC),euk, score=33.78} {Pfam: Pyridoxal-phosphate dependent enzyme [PF00291.23, score=174.6]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.20, score=121.9]} {Human: ENSG00000107105, ELAVL2, ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B), [Score=154, Expect=1e-40]; ENSG00000162374, ELAVL4, ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D), [Score=152, Expect=5e-40]; ENSG00000066044, ELAVL1, ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R), [Score=151, Expect=7e-40]} {Dmel: FBgn0086675, fne, found in neurons, [Score=155, Expect=1e-41]; FBgn0010263, Rbp9, RNA-binding protein 9, [Score=154, Expect=4e-40]} {Celegans: WBGene00001368, exc-7, Caenorhabditis elegans Protein EXC-7 (exc-7) mRNA, complete cds., [Score=143, Expect=2e-36]} {Smed: dd_Smed_v6_11311_0_2, [Score=139, Expect=2e-35]; dd_Smed_v6_2842_0_1, [Score=139, Expect=1e-33]; dd_Smed_v6_8376_0_1, [Score=135, Expect=3e-33]} {Smes: dd_Smes_v1_98736_1_1, [Score=142, Expect=6e-36]; dd_Smes_v1_40234_2_1, [Score=139, Expect=1e-33]; dd_Smes_v1_30831_1_3, [Score=139, Expect=2e-35]; dd_Smes_v1_33518_2_1, [Score=135, Expect=3e-33]} {Smans: Smp_137330.1, [RH, Score=156, Expect=1e-39]} {UniRef: UniRef50_G7YIB4, Serine dehydratase-like (Fragment) n=1 Tax=Clonorchis sinensis TaxID=79923 RepID=G7YIB4_CLOSI, [Score=173, Expect=5e-42]} {RNA1509_20260, RNA1509_5868}
15. MligTCv3c-16931.1 Mlig005088.g1 5.66 0.069 0.646

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Germline

Mlig005088.g1 {Length: 974} {RNA1509_3127, RNA1509_5693}
16. MligTCv3c-10822.1 Mlig002940.g1, Mlig033181.g1 5.61 -0.065 0.425

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CORO1B cor-1

Mlig002940.g1 {Length: 4704} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF1899) [PF08953.9, score=110.8]; Type of WD40 repeat [PF16300.3, score=67.6]; WD domain, G-beta repeat [PF00400.30, score=24.3]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.5, score=20.9]} {Human: ENSG00000172725, CORO1B, coronin, actin binding protein, 1B, [RH, Score=465, Expect=1e-159]; ENSG00000167549, CORO6, coronin 6, [RH, Score=457, Expect=1e-156]; ENSG00000110880, CORO1C, coronin, actin binding protein, 1C, [RH, Score=446, Expect=1e-152]} {Dmel: FBgn0265935, coro, coro, [RH, Score=452, Expect=1e-153]} {Celegans: WBGene00000768, cor-1, Caenorhabditis elegans Protein COR-1, isoform d (cor-1) mRNA, complete cds., [RH, Score=368, Expect=1e-120]} {Smed: dd_Smed_v6_448_0_1, [RH, Score=486, Expect=1e-167]} {Smes: dd_Smes_v1_42280_1_1, [RH, Score=485, Expect=1e-167]} {Smans: Smp_012720.1, [RH, Score=507, Expect=1e-176]} {UniRef: UniRef50_A0A068XMQ5, Coronin n=4 Tax=Cyclophyllidea TaxID=6201 RepID=A0A068XMQ5_HYMMI, [Score=498, Expect=1e-170]} {RNA1509_13178, RNA1509_15548, RNA1509_36109}

Mlig033181.g1 {Length: 4654} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF1899) [PF08953.9, score=110.8]; Type of WD40 repeat [PF16300.3, score=67.6]; WD domain, G-beta repeat [PF00400.30, score=24.7]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.5, score=22.7]; Protein of unknown function (DUF972) [PF06156.11, score=20.1]} {Human: ENSG00000172725, CORO1B, coronin, actin binding protein, 1B, [RH, Score=465, Expect=1e-159]; ENSG00000167549, CORO6, coronin 6, [RH, Score=457, Expect=1e-156]; ENSG00000110880, CORO1C, coronin, actin binding protein, 1C, [RH, Score=446, Expect=1e-152]} {Dmel: FBgn0265935, coro, coro, [RH, Score=452, Expect=1e-154]} {Celegans: WBGene00000768, cor-1, Caenorhabditis elegans Protein COR-1, isoform d (cor-1) mRNA, complete cds., [RH, Score=368, Expect=1e-120]} {Smed: dd_Smed_v6_448_0_1, [RH, Score=484, Expect=1e-167]} {Smes: dd_Smes_v1_42280_1_1, [RH, Score=484, Expect=1e-167]} {Smans: Smp_012720.1, [RH, Score=507, Expect=1e-176]} {UniRef: UniRef50_A0A068XMQ5, Coronin n=4 Tax=Cyclophyllidea TaxID=6201 RepID=A0A068XMQ5_HYMMI, [Score=498, Expect=1e-170]} {RNA1509_12118, RNA1509_13178, RNA1509_15222, RNA1509_39223}
17. MligTCv3c-12908.2 Mlig030996.g1, Mlig028891.g1 5.42 0.247 0.002

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GRAMD1B ZC328.3

Mlig030996.g1 {Length: 7519} {TRANSSPLICED} {Pfam: GRAM domain [PF02893.18, score=61.7]; Domain of unknown function (DUF4782) [PF16016.3, score=32.6]} {Human: ENSG00000023171, GRAMD1B, GRAM domain containing 1B, [RH, Score=161, Expect=2e-43]} {Dmel: FBgn0085423, CG34394, , [RH, Score=147, Expect=3e-37]} {Celegans: WBGene00022593, ZC328.3, Caenorhabditis elegans Protein ZC328.3, isoform b (ZC328.3) mRNA, complete cds., [Score=77.4, Expect=7e-15]} {Smed: dd_Smed_v6_9355_0_1, [Score=110, Expect=2e-25]} {Smes: dd_Smes_v1_6869_1_1, [Score=110, Expect=2e-25]} {Smans: Smp_212360.1, [RH, Score=113, Expect=2e-26]} {UniRef: UniRef50_Q3KR37, GRAM domain-containing protein 1B n=439 Tax=Amniota TaxID=32524 RepID=GRM1B_HUMAN, [Score=160, Expect=7e-40]; UniRef50_UPI0006D4EC26, PREDICTED: GRAM domain-containing protein 1A-like n=1 Tax=Halyomorpha halys TaxID=286706 RepID=UPI0006D4EC26, [Score=159, Expect=9e-41]} {RNA1509_12457, RNA1509_47174}

Mlig028891.g1 {Length: 6518} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4782) [PF16016.3, score=81.3]; GRAM domain [PF02893.18, score=61.1]} {Human: ENSG00000023171, GRAMD1B, GRAM domain containing 1B, [Score=160, Expect=6e-42]} {Dmel: FBgn0085423, CG34394, , [RH, Score=146, Expect=8e-36]} {Celegans: WBGene00022593, ZC328.3, Caenorhabditis elegans Protein ZC328.3, isoform b (ZC328.3) mRNA, complete cds., [Score=110, Expect=8e-25]} {Smed: dd_Smed_v6_9355_0_1, [Score=110, Expect=8e-25]} {Smes: dd_Smes_v1_6869_1_1, [Score=110, Expect=9e-25]} {Smans: Smp_212360.1, [RH, Score=111, Expect=3e-25]} {UniRef: UniRef50_UPI0006962FBA, PREDICTED: GRAM domain-containing protein 1B-like isoform X1 n=7 Tax=Lingula unguis TaxID=7574 RepID=UPI0006962FBA, [Score=211, Expect=3e-55]} {RNA1509_12457}
18. MligTCv3c-562.7525 Mlig033615.g2, Mlig025830.g5, Mlig025830.g3, Mlig021962.g1, Mlig013006.g1, Mlig013006.g3, Mlig013899.g2, Mlig007858.g1, Mlig001926.g3, Mlig001924.g1 5.34 0.769 0.000

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RTL1

Mlig033615.g2 {Length: 530} {NoTransDecoderORF} {RNA1509_35450}

Mlig025830.g5 {Length: 8714} {Pfam: Zinc knuckle [PF00098.21, score=33.7]} {RNA1509_12781}

Mlig025830.g3 {Length: 10325} {RNA1509_12781}

Mlig021962.g1 {Length: 2597} {NoTransDecoderORF} {RNA1509_35450}

Mlig013006.g1 {Length: 10670} {Pfam: Zinc knuckle [PF00098.21, score=33.7]} {RNA1509_12781}

Mlig013006.g3 {Length: 16354} {Pfam: Zinc knuckle [PF00098.21, score=31.9]} {RNA1509_9188}

Mlig013899.g2 {Length: 3870} {Pfam: Zinc knuckle [PF00098.21, score=32.3]; Zinc knuckle [PF13696.4, score=18.8]} {RNA1509_12781}

Mlig007858.g1 {Length: 8647} {Pfam: Zinc knuckle [PF00098.21, score=36.0]; Zinc knuckle [PF13696.4, score=18.3]} {RNA1509_12781}

Mlig001926.g3 {Length: 2988} {RNA1509_33135}

Mlig001924.g1 {Length: 15029} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.25, score=69.3]; Aspartyl protease [PF13650.4, score=36.3]; gag-polyprotein putative aspartyl protease [PF13975.4, score=32.7]} {Human: ENSG00000254656, RTL1, retrotransposon-like 1, [Score=96.7, Expect=8e-20]} {Smed: dd_Smed_v6_1574_6_43, [Score=248, Expect=1e-72]} {Smes: dd_Smes_v1_42137_1_2, [Score=287, Expect=1e-81]; dd_Smes_v1_42102_2_1, [Score=280, Expect=9e-84]} {Smans: Smp_185440.1, [Score=225, Expect=3e-62]} {UniRef: UniRef50_A0A0M4HFM6, Retrovirus-related polyprotein n=2 Tax=Macrostomum lignano TaxID=282301 RepID=A0A0M4HFM6_9PLAT, [Score=416, Expect=1e-125]} {RNA1509_9188}
19. MligTCv3c-12179.0 Mlig017238.g1, Mlig003140.g1, Mlig013606.g1 5.31 0.220 0.010

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TLCD1 Y63D3A.8

Mlig017238.g1 {Length: 4311} {Pfam: TLC domain [PF03798.14, score=65.9]} {Human: ENSG00000160606, TLCD1, TLC domain containing 1, [Score=87.4, Expect=1e-19]} {Celegans: WBGene00013407, Y63D3A.8, Caenorhabditis elegans Protein Y63D3A.8 (Y63D3A.8) mRNA, complete cds., [Score=87.8, Expect=1e-19]} {Smed: dd_Smed_v6_6951_0_1, [RH, Score=270, Expect=4e-90]; dd_Smed_v6_5810_0_1, [RH, Score=260, Expect=4e-86]} {Smes: dd_Smes_v1_67411_1_1, [RH, Score=268, Expect=2e-89]; dd_Smes_v1_27876_1_1, [RH, Score=260, Expect=5e-86]} {Smans: Smp_140510.1, [RH, Score=242, Expect=1e-79]} {UniRef: UniRef50_UPI0006965800, PREDICTED: TLC domain-containing protein 2-like n=2 Tax=Lingula unguis TaxID=7574 RepID=UPI0006965800, [Score=243, Expect=5e-77]; UniRef50_G4V9S9, Putative transmembrane protein 56 n=5 Tax=Digenea TaxID=256429 RepID=G4V9S9_SCHMA, [Score=242, Expect=8e-77]} {RNA1509_9217}

Mlig003140.g1 {Length: 4423} {Pfam: TLC domain [PF03798.14, score=66.2]} {Human: ENSG00000160606, TLCD1, TLC domain containing 1, [Score=89.0, Expect=3e-20]} {Celegans: WBGene00013407, Y63D3A.8, Caenorhabditis elegans Protein Y63D3A.8 (Y63D3A.8) mRNA, complete cds., [Score=89.4, Expect=3e-20]} {Smed: dd_Smed_v6_6951_0_1, [RH, Score=271, Expect=8e-91]; dd_Smed_v6_5810_0_1, [RH, Score=261, Expect=1e-86]} {Smes: dd_Smes_v1_67411_1_1, [RH, Score=270, Expect=4e-90]; dd_Smes_v1_27876_1_1, [RH, Score=261, Expect=1e-86]} {Smans: Smp_140510.1, [RH, Score=244, Expect=3e-80]} {UniRef: UniRef50_UPI0006965800, PREDICTED: TLC domain-containing protein 2-like n=2 Tax=Lingula unguis TaxID=7574 RepID=UPI0006965800, [Score=245, Expect=1e-77]; UniRef50_G4V9S9, Putative transmembrane protein 56 n=5 Tax=Digenea TaxID=256429 RepID=G4V9S9_SCHMA, [Score=244, Expect=2e-77]} {RNA1509_16109, RNA1509_48897, RNA1509_9217} {WURTZEL: Epidermal lineage (early + late + mature) [dd_Smed_v6_6951_0_1, TLC domain containing 1 (TLCD1)]}

Mlig013606.g1 {Length: 4566} {Pfam: TLC domain [PF03798.14, score=66.2]} {Human: ENSG00000160606, TLCD1, TLC domain containing 1, [Score=89.0, Expect=3e-20]} {Celegans: WBGene00013407, Y63D3A.8, Caenorhabditis elegans Protein Y63D3A.8 (Y63D3A.8) mRNA, complete cds., [Score=89.4, Expect=4e-20]} {Smed: dd_Smed_v6_6951_0_1, [RH, Score=271, Expect=8e-91]; dd_Smed_v6_5810_0_1, [RH, Score=261, Expect=1e-86]} {Smes: dd_Smes_v1_67411_1_1, [RH, Score=270, Expect=4e-90]; dd_Smes_v1_27876_1_1, [RH, Score=261, Expect=1e-86]} {Smans: Smp_140510.1, [RH, Score=244, Expect=3e-80]} {UniRef: UniRef50_UPI0006965800, PREDICTED: TLC domain-containing protein 2-like n=2 Tax=Lingula unguis TaxID=7574 RepID=UPI0006965800, [Score=245, Expect=5e-78]; UniRef50_G4V9S9, Putative transmembrane protein 56 n=5 Tax=Digenea TaxID=256429 RepID=G4V9S9_SCHMA, [Score=244, Expect=2e-77]} {RNA1509_20305, RNA1509_51036, RNA1509_9217} {WURTZEL: Epidermal lineage (early + late + mature) [dd_Smed_v6_6951_0_1, TLC domain containing 1 (TLCD1)]}
20. MligTCv3c-16931.3 Mlig007432.g2 5.23 0.252 0.009

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Germline

Mlig007432.g2 {Length: 2176} {TRANSSPLICED} {RNA1509_33931, RNA1509_56237}
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